Publications

  • Dehydration induced dynamical heterogeneity and ordering mechanism of lipid bilayers, Sheeba Malik and Ananya Debnath, J. Chem. Phys. 154, 174904 (2021), https://doi.org/10.1063/5.0044614
  • Invited article in the Special Collection in Honor of Women in Chemical Physics and Physical Chemistry Monomer_aggregate
  • A Comparative Study on DMSO-Induced Modulation of the Structural and Dynamical Properties of Model Bilayer Membranes, Sangita Kundu, Sheeba Malik, Meghna Ghosh, Sourav Nandi, Arghajit Pyne, Ananya Debnath*, and Nilmoni Sarkar*Langmuir, 2021, 37, 6, 2065–2078.
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  • Interactions Determining the Structural Integrity of the Trimer of Plant Light Harvesting Complex in Lipid Membranes, Renu Saini, Christoph Globisch, Leon Franke, Christine Peter and Ananya Debnath*,Journal of Membrane Biology, 2021 Jan 11. doi: 10.1007/s00232-020-00162-x
  • Invited article on the special issue on Molecular Interplay at the Membrane. Monomer_aggregate

  • Modulation of Membrane Fluidity to Control Interfacial Water Structure and Dynamics in Saturated and Unsaturated Phospholipid Vesicles, Dipankar Mondal, Sheeba Malik, Pavel Banerjee, Niloy Kundu, Ananya Debnath* and Nilmoni Sarkar*, Langmuir, 2020, 36, 41, 12423–12434, https://doi.org/10.1021/acs.langmuir.0c02736.
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  • Dynamic coupling of hydration layer to a fluid phospholipid membrane: Intermittency and multiple time-scale relaxations", Abhinav Srivastava#, Sheeba Malik#, Smarajit Karmakar and Ananya Debnath*, Physical Chemistry Chemical Physics, 2020, 22, 21158-21168, doi ="10.1039/D0CP02803G", #equal first author.
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  • Asymmetry and Rippling in Mixed Surfactant Bilayers from All-Atom and Coarse-Grained Simulations: Interdigitation and Per Chain Entropy, Arpita Srivastava and Ananya Debnath*, , The Journal of Physical Chemistry B, 2020, 124, 29, 6420–6436. https://doi.org/10.1021/acs.jpcb.0c03761
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  • Molecular dynamics simulations of a stacked π–conjugated soft material: binding energy and preferential geometry for self-assembly, Arpita Srivastava, Avinash Garg, Debapratim Das and Ananya Debnath*, Invited article on Bulletin of Materials Science for the Thematic issue on Soft Materials, 2020, 43, 181, 1-8. https://doi.org/10.1007/s12034-020-2053-4
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  • Quantification of spatio-temporal scales of dynamical heterogeneity of water near lipid membranes above supercooling, Abhinav Srivatsava, Smarajit Karmakar and Ananya Debnath*, Soft Matter, 2019, 15, 9805 - 9815, DOI: 10.1039/C9SM01725A.
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  • Heterogeneity in structure and dynamics of water near bilayers using TIP3P and TIP4P/2005 water models, Abhinav Srivastava, Sheeba Malik and Ananya Debnath*, Chemical Physics, 525, 2019, 110396.
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  • Unusual confinement properties of a water insoluble small peptide hydrogel, Nilotpal Singha, Arpita Srivastava, Bapan Pramanik, Sahnawaz Ahmed, Payel Dowari, Sumit Chowdhuri, Basab Kanti Das, Ananya Debnath* and Debapratim Das*, Chemical Science, 2019,10, 5920-5928.
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  • Hydration dynamics of a lipid membrane: Hydrogen bond networks and lipid-lipid associations, Abhinav Srivastava and Ananya Debnath*, The Journal of Chemical Physics (2018), 094901 (2018); https://doi.org/10.1063/1.5011803.
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  • Solvent Assisted Tuning of Morphology of a Peptide-Perylenediimide Conjugate: Helical Fibers to Nano-Rings and their Differential Semiconductivity, Sahnawaz Ahmed, Bapan Pramanik, K. N. Amba Sankar, Abhinav Srivastava, Nilotpal Singha, Payel Dowari, Arpita Srivastava, Kallol Mohanta, Ananya Debnath, Debapratim Das*, Scientific Reports (2017), 7, Article number: 9485, doi:10.1038/s41598-017-09730-z.
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  • Trigonella seed extract ameliorates inflammation via regulation of inflammasome adaptor protein, ASC, Nidhi Sharma, Samyuktha Suresh, Ananya Debnath, Sushmita Jha*, Frontiers In Bioscience, Elite, (2017), 9, 246-257.
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  • Influence of water concentrations on the phase transformation of a model surfactant/co-surfactant/water system, Raju Lunkad, Arpita Srivastava, Ananya Debnath*, Chemical Physics, (2017) 483–484, 103–111.
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  • Derivation of coarse-grained simulation models of chlorophyll molecules in lipid bilayers for applications in light harvesting systems Ananya Debnath*, Sabine Wiegand, Harald Paulsen, Kurt Kremer, Christine Peter, Physical Chemistry Chemical Physics, (2015), 17, 22054-22063.
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  • Structure and Dynamics of Phospholipid Nanodiscs from All-Atom and Coarse-Grained Simulations Ananya Debnath* and Lars V. Schaefer*, The Journal of Physical Chemistry B, 2015, 119 (23), pp 6991–7002.
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  • Laterally structured ripple and square phases with one and three dimensional thickness modulations in a model bilayer system - Ananya Debnath, Foram M. Thakkar, Prabal K. Maiti, V. Kumaran and K. G. Ayappa*, Soft Matter, (2014), 10, 7630-7637.
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  • Diffusion in an elastic medium: A model for macromolecule transport across the nuclear pore complex - Rajarshi Chakrabarti, Ananya Debnath, K.L. Sebastian*, Physica A , 404, 65–78 (2014).
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  • Simulation of Influence of Bilayer Melting on Dynamics and Thermodynamics of Interfacial Water - Ananya Debnath*, K. G. Ayappa* and Prabal K. Maiti*, Physical Review Letter, 110, 018303 (2013).
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  • Barrier crossing in one and three dimensions by a long chain - Ananya Debnath*, Alok K R Paul and K L Sebastian, J. Stat. Mech. Theory & Exp., P11024 (2010).
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  • Dynamics and Entropy of Water in the Hydration layer of Lipid Bilayer - Ananya Debnath, Biswaroop Mukherjee, Prabal Maiti, Ganapathy Ayappa*, and S. T. Lin , Journal of Chemical Physics , 133, 174704 (2010). Selected for Virtual Journal of Biological Physics Research, November 15, 2010 Issue.
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  • The influence of Bilayer Composition on the Gel to Liquid Crystalline Transition - Ananya Debnath, Ganapathy Ayappa*, V. Kumaran and Prabal Maiti, Journal of Phyical Chemistry B , 113 (31), 10660 (2009).
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  • Barrier Crossing by a Star Polymer - Ananya Debnath and K. L. Sebastian*, Physical Review E, 76, 051803 (2007). Selected for Virtual Journal of Biological Physics Research, November 15, 2007.
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  • Polymer in a double well: dynamics of translocation of short chains over a barrier - K. L. Sebastian* and Ananya Debnath, Journal of Physics: Condensed Matter 18, S283-S296 (2006).
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  • Rate Processes with Dynamical Disorder: A Direct Variational Approach - Ananya Debnath, Rajarshi Chakrabarti and K. L. Sebastian*, Journal of Chemical Physics , 124 (20) 204111 (2006).
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    Conference paper

  • Cylindrical to Spherical Shape transformations of Micelles using All-Atom and Coarse-Grained Molecular Dy- namics Simulations- Arpita Srivastava, Ananya Debnath*, AIP Conference Proceedings, 2142, 130004 (2019); https://doi.org/10.1063/1.5122512.
  • Inducing the Two-Dimensional Ripple Phase In Surfactant Bilayer Membranes - Ananya Debnath, Foram M. Thakkar, Prabal K. Maiti, V. Kumaran and K. G. Ayappa, 10, 2011, Proceedings AIChE Annual Meeting.

  • *Corresponding author